PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g142410.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 359aa    MW: 39210.4 Da    PI: 9.7692
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g142410.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.42.3e-31287344359
                       -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       D y+WrKYGqK++kgs++pr+YY+C+s+ gC ++k+ver+ +dp+++++tYeg+Hnh+
  Pd.00g142410.m01 287 DDYSWRKYGQKPIKGSPHPRGYYKCSSQrGCLARKHVERALDDPTMLIVTYEGDHNHS 344
                       99************************999****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MAVELMMGFI DSFAAQMEEN AVKEAASAGI QSVEKFISLI SQHHHQFQDS SFSSSSNPEA  60
ATEYKAVADM AVNKFRKVIS LLDKGRTGHA RFRRAPVTPS PPPQETETQI PRPSIQEPHN  120
PKTDQPPGFK TEQSSAFKVY CPTPSVRLPP LPHNPHLKTT PVVLTKSVGC AERKLDAPTT  180
INFSPSPSIS AANSFMSSLT TGDAEGSVQH SMSSGFQFTN MSQSSSGKPP LSSSSLKRKC  240
NSMDDVAALR CGSSSGRCHC SKKRKSKVKR VVRVPAISMK MADIPPDDYS WRKYGQKPIK  300
GSPHPRGYYK CSSQRGCLAR KHVERALDDP TMLIVTYEGD HNHSHSVTDP TPVLVLESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.13e-80WRKY family protein