PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g149930.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 281aa MW: 31669.5 Da PI: 7.2812

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g149930.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	86.6	4.8e-27	12	141	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklel..eevikevdiykvePwdLp.k...kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 lppG+rF P++e+l+++yL +k ++++ + + i+e+d+y+++P dLp + ++ + ++ ++F+ + + k+r +ksgyW+ +g Pd.00g149930.m01 12 LPPGCRFYPSEEQLLCCYLSNKNDADPAQSggYDLIRELDLYDHDPFDLPdSacyAYGHAGRKRHWFCYTVRVL-----KERRAKSGYWRRKG 99 79********************99966522567**********9535552222334555555555543.....3455699*** PP NAM 88 kdkevlsk.kgelvglkktLvfykgrapk.gektdWvmheyr 127 +d++v+ + ++++ g ++++vfy g++p+ +++tdWv+ +y+ Pd.00g149930.m01 100 RDRDVVGRgGKAVLGRRTSFVFYLGNSPNtAVRTDWVLYQYA 141 ***9556678*****997665167*******6 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MGDPKATSLR SLPPGCRFYP SEEQLLCCYL SNKNDADPAQ SGGYDLIREL DLYDHDPFDL 60 PDSACYAYGH AGRKRHWFCY TVRVLKERRA KSGYWRRKGR DRDVVGRGGK AVLGRRTSFV 120 FYLGNSPNTA VRTDWVLYQY AQVDHVKASF VLCRVFVRSR HGNRLSYNGV SSCAEESACT 180 VRHIGIQHDG FHTPNIVETE VHGDNSAHRK NEMLSFPMRL DCEINDRVKN GPVSISRLQP 240 NGQVPSSVLG GSNPIFLDDL ATEHLLSIVE GDFIELDDLN D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	7e-22	NAC family protein