PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g150090.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 139aa    MW: 15345.6 Da    PI: 10.2569
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g150090.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.93.8e-3267124359
                       -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       D y+WrKYGqK++kgs++pr+YY+C+s+ gC ++k+ver+ +dp+++++tYeg+Hnh+
  Pd.00g150090.m01  67 DDYSWRKYGQKPIKGSPHPRGYYKCSSQrGCLARKHVERALDDPTMLIVTYEGDHNHS 124
                       99************************999****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MSQSSSGKPP LSSSSLKRKC NSMDDVAALR CGSSSGRCHC SKKRKSKVKR VVRVPAISMK  60
MADIPPDDYS WRKYGQKPIK GSPHPRGYYK CSSQRGCLAR KHVERALDDP TMLIVTYEGD  120
HNHSHSVTDP TPALVLESS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23320.14e-44WRKY family protein