PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g150560.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 243aa    MW: 25115.4 Da    PI: 8.6378
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g150560.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY63.73.1e-202471559
                      -TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY 15 vkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                       kg+++pr+YYrCt+a gCpv+k+v+r aed++++++tYeg+H h+
  Pd.00g150560.m01  2 AKGNPCPRAYYRCTMAsGCPVRKQVQRLAEDKTILITTYEGNHSHP 47
                      59*************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MAKGNPCPRA YYRCTMASGC PVRKQVQRLA EDKTILITTY EGNHSHPLPP AATAMANTTS  60
AAAAMLLSAS APFPTITLDL TQSPMQQFHR IPPPSSSTFP LPLHGYHQLM GGPGHPIPGP  120
TYFPPNYKAP PPPAGVSLGG QRSTSTHASG MIETVSAAIA SDPNFTAALA EAISTIMGAP  180
RPHQGHQGGI NINDGEIANN NAARGLVAST NNSPPSANIG LPPGSLQPGS PQLPQSCTTF  240
STN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.12e-25WRKY family protein