PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g155200.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

LBD

Protein Properties

Length: 173aa MW: 19335.5 Da PI: 4.38

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g155200.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	55.7	1.4e-17	6	80	27	101
DUF260 27 pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101 +f +h +FGa++++++l+ lp ++r a ++++eA+ara dP+yGa++ il+lq+q+ + +a+l++++e+l Pd.00g155200.m01 6 ITDFSSIHNVFGANKMSRILSMLPMSKRAVASWTMTFEAHARAVDPIYGATSYILDLQEQVLNIQAQLDEAHEQL 80 5789******************************************************************99985 PP

Sequence ? help Back to Top
Protein Sequence Length: 173 aa Download sequence
MHEEAITDFS SIHNVFGANK MSRILSMLPM SKRAVASWTM TFEAHARAVD PIYGATSYIL 60 DLQEQVLNIQ AQLDEAHEQL ACAIAPVADP NQDLENSIEQ SEVANPTEQT AVAKPTEFES 120 LPQFSFTHTN NVYNENMNLN YHVSGSYKNT VNIPTENVAD GWVNNEVKVY ARM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58190.1	2e-22	LBD family protein