PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g155460.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 149aa    MW: 17193.7 Da    PI: 10.8219
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g155460.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.51.1e-1565124155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV++++++gr++A+++d  ++  g  ++ ++ +lg ++ +e+Aa+a++ a++k++g
  Pd.00g155460.m01  65 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqtRKgRQAYLGGYDMEEKAARAYDLAALKYWG 124
                       78*******************988886678446*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MTVKLSSNRL SWRTLWRMLE DHVENVGVKL VRQAGAKTKE RGGGKLSQKQ PVHRKSIDTF  60
GQRTSQYRGV TRHRWTGRYE AHLWDNSCKK EGQTRKGRQA YLGGYDMEEK AARAYDLAAL  120
KYWGSATHIN FPDNLMCTKM LHLGTPLRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.18e-52AP2 family protein