PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g156130.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 233aa    MW: 25374.1 Da    PI: 4.7857
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g156130.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY74.71.1e-2376119244
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSS CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaed 44 
                       +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ +
  Pd.00g156130.m01  76 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSQPE 119
                       69*************************998***********965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MDPKFYRISP FGTDPADPDQ PMTSENGPGS PSSGEETKVA TAPSPKKRRG VQKRVVTVPI  60
GDVEGSKSKG EGHPPSDSWA WRKYGQKPIK GSPYPRGYYR CSSSKGCPAR KQVERSQPEL  120
PAKTVTPNDE ELTIFASQVD LDLSDDSATL LSAFGWFSDV ASTTVLESPI CAGNSSCADY  180
DVATRLGDEE DEYLFADLGE LPEGSVIFRH KMVESDEQNR RCSLSVVPCC NSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.12e-48WRKY family protein