PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g160690.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YA
Protein Properties Length: 375aa    MW: 41138.3 Da    PI: 8.4745
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g160690.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.22.4e-32172228158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep+YVNaKQy++Il+RRq+Rak e ekkl +k+rkpylheSRh hAlrR+Rg+gGrF
  Pd.00g160690.m02 172 EEPVYVNAKQYHGILRRRQSRAKTELEKKL-IKARKPYLHESRHLHALRRARGCGGRF 228
                       69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MMPAKSKDED PHIEHGAQTV LESAIYAQPW WRGVGNNSSS GESAPASSLV DHCDSMVMNG  60
AMQSQANARL DGGANFNKEL RTTVGSQSDQ KNGCKNQQIK SVSSSVVPTM GEHLDPNSQM  120
ELVGHSIVLT SYPYSDPQYG RMLTPYGAQA MLPPHFYGIH HGRMPLPLEM EEEPVYVNAK  180
QYHGILRRRQ SRAKTELEKK LIKARKPYLH ESRHLHALRR ARGCGGRFLN TKKQDDNDEN  240
SSVEKGMHLD ANDSAQSAKS SFECFPNTSN GTFDSSNVQQ EGSDPWFRAH KNHTLSGDNG  300
NGHGPSSAYP STFLYEVKLK ACAVSLGVKP CCAMSISGKS FLALVTSVII GVLWKEIGVK  360
SMLSSVSRHL HSLVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.15e-39NF-YA family protein