PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g165770.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 120aa    MW: 13738 Da    PI: 10.6216
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g165770.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.82.4e-1017901483
                      T-EE--HHH.HTT.---..--SEEEEEE.TTS-EEEEEE..EEETTE....EEE-TTHHHHHHHHT--TT-EEEEE CS
                B3 14 grlvlpkkfaeeh.ggkkeesktltled.esgrsWevkliyrkksgr....yvltkGWkeFvkangLkegDfvvFk 83
                      grlv+p++ ++     ++ + + + + d +++r++ ++l   +++gr    ++ ++GWk+Fvk++g+ +gD v F 
  Pd.00g165770.m01 17 GRLVVPRDMLAMLpPVSPGNAISINVLDrPTNRVYVFQL--AGRRGRylkpVIQSRGWKRFVKDKGIAVGDEVWFW 90
                      689******98889555667788999998999*******..88888844544555****************99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
MELAHGVKKV ITATDVGRLV VPRDMLAMLP PVSPGNAISI NVLDRPTNRV YVFQLAGRRG  60
RYLKPVIQSR GWKRFVKDKG IAVGDEVWFW EEENPTYQTQ YRIAVFKPNL FPRHPDLHGV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25560.13e-07RAV family protein