PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g165910.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 95aa    MW: 11087.8 Da    PI: 8.9535
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g165910.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.43.8e-11488184
                      EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE CS
                B3  1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkl 84
                      f+k+ltpsdv+++  l + +  +e   +++++ ++ +++ de+g+++ ++l+ r+++++  ++ +k Wk Fvk+ g+ +gD++ F +
  Pd.00g165910.m01  4 FEKELTPSDVNQR--LAVTRGMLEFLpQIDPAHDVPIRVLDETGKVYMFYLSGRQGKDKkpVFQAKHWKVFVKERGIAAGDVMYFWR 88
                      99********976..89999999777999999*******************88555555667778******************9974 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
MNRFEKELTP SDVNQRLAVT RGMLEFLPQI DPAHDVPIRV LDETGKVYMF YLSGRQGKDK  60
KPVFQAKHWK VFVKERGIAA GDVMYFWREE NALSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25560.11e-07RAV family protein