PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g167250.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family YABBY
Protein Properties Length: 230aa    MW: 25621 Da    PI: 8.1703
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g167250.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY243.83.5e-75211932170
             YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee...lleelkveeenlksnvekees 91 
                       ++ s s+q+Cyv+CnfC+t+lavsvP +slfk+vtvrCGhC++llsvn++      + ++hl + + ++   lle+++++ ++ + ++++ + 
  Pd.00g167250.m01  21 HLLSPSDQLCYVHCNFCDTVLAVSVPCSSLFKTVTVRCGHCSNLLSVNMRALLLPPPNNQHLPHPFFNSphnLLEDMRNAPSSNTLMNHQPNY 113
                       56789**********************************************99999*******998877445777777766666555555555 PP

             YABBY  92 astsvsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                       +++s+ + +    +++e+p++p  v+rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl
  Pd.00g167250.m01 114 TNESIMAIRGGGLDHQEIPKPPAaVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 193
                       55555554547788999**999889*****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MSSAAASSTA FNSPDQQQQQ HLLSPSDQLC YVHCNFCDTV LAVSVPCSSL FKTVTVRCGH  60
CSNLLSVNMR ALLLPPPNNQ HLPHPFFNSP HNLLEDMRNA PSSNTLMNHQ PNYTNESIMA  120
IRGGGLDHQE IPKPPAAVNR PPEKRQRVPS AYNRFIKDEI QRIKAGNPDI SHREAFSAAA  180
KNWAHFPHIH FGLMPDQPVK KTNMRQQEGE DMLMKDGFFS TPANVGVSPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.11e-86YABBY family protein