PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g167250.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family YABBY
Protein Properties Length: 231aa    MW: 25749.1 Da    PI: 8.1703
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g167250.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY243.93.2e-75211942170
             YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee....lleelkveeenlksnvekee 90 
                       ++ s s+q+Cyv+CnfC+t+lavsvP +slfk+vtvrCGhC++llsvn++      + ++hl + + ++    l+e+++++ ++ + ++++ +
  Pd.00g167250.m02  21 HLLSPSDQLCYVHCNFCDTVLAVSVPCSSLFKTVTVRCGHCSNLLSVNMRALLLPPPNNQHLPHPFFNSphnlLQEDMRNAPSSNTLMNHQPN 113
                       56789**********************************************99999*******998877556556666666555555444444 PP

             YABBY  91 sastsvsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                        +++s+ + +    +++e+p++p  v+rPPekrqrvPsaynrfik+eiqrika+nPdishreafsaaaknWahfP+ihfgl
  Pd.00g167250.m02 114 YTNESIMAIRGGGLDHQEIPKPPAaVNRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 194
                       444444444447778999**999889*****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MSSAAASSTA FNSPDQQQQQ HLLSPSDQLC YVHCNFCDTV LAVSVPCSSL FKTVTVRCGH  60
CSNLLSVNMR ALLLPPPNNQ HLPHPFFNSP HNLLQEDMRN APSSNTLMNH QPNYTNESIM  120
AIRGGGLDHQ EIPKPPAAVN RPPEKRQRVP SAYNRFIKDE IQRIKAGNPD ISHREAFSAA  180
AKNWAHFPHI HFGLMPDQPV KKTNMRQQEG EDMLMKDGFF STPANVGVSP Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.18e-85YABBY family protein