PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g170630.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 220aa    MW: 23968.4 Da    PI: 6.0191
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g170630.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.22.5e-3144102259
                       --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                        D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+ver+++dp+++++tY+ eHnh+
  Pd.00g170630.m01  44 ADIWAWRKYGQKPIKGSPYPRGYYRCSSSkGCMARKQVERNRSDPNMFIVTYTAEHNHP 102
                       69*************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MEDDWDLQAV PSSHSVSSTT TPRSKKRKNQ LKKVCQVPAE SLSADIWAWR KYGQKPIKGS  60
PYPRGYYRCS SSKGCMARKQ VERNRSDPNM FIVTYTAEHN HPAPTHRNSL AGSTRQKPFS  120
PQTVTGSDST KPTSPGTSAS VDEDPGVPQS TTMESFKEEK GSPMVDDDDD ELFGMCDSVV  180
SDDFFVGLEG LAGDYFSDHS PTSFGVPWVS SNAATAAGSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.15e-75WRKY family protein