PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g172890.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 220aa    MW: 24246.8 Da    PI: 6.2543
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g172890.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.77.1e-1970120155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr ++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  Pd.00g172890.m01  70 PVYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFSTAEMAARAHDVAALSIKG 120
                       68*****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MAAEPNNSEL AQSTSNSSSS SRLLQTHPTS PSNSLKSKTK THKASSQHQQ QHQVALKRKR  60
DDDSSSSKHP VYRGVRMRSW GKWVSEIREP RKKSRIWLGT FSTAEMAARA HDVAALSIKG  120
NSAILNFPEL AELLPRPASL KPQDVQAAAT KAAAMSEGPE SEELGEIVEL PNIEGSFDSP  180
ESRNEFIFVN DSEDGWVYPS MGLDEVEFNL WGFFSSDNGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.12e-51ERF family protein