PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g178700.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 171aa    MW: 19517.8 Da    PI: 6.7855
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g178700.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.51.3e-1276117446
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       W ++++ ll++a +++G g+W+ +a+++g +++ +qc++++ +
  Pd.00g178700.m01  76 WNADDEILLLEATEMYGLGNWAEVAEHVG-TKSKEQCIEHYTN 117
                       *****************************.***********88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MDRSRGNFHS DEDPTQRSRR KKNASTGEKL ESSAEGQGIS EGKRAYHCNY CNKDITGKIR  60
IKVMDNLSFP LICPDWNADD EILLLEATEM YGLGNWAEVA EHVGTKSKEQ CIEHYTNVYL  120
NSQRFPIPDM SHVEGKNRKE LLAMAKGHGE DKKEATRFAY QFVQRSPVAD Y