PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g179770.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 183aa    MW: 20232.2 Da    PI: 7.003
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g179770.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.70.00079106121116
                       EEETTTTEEESSHHHH CS
           zf-C2H2   1 ykCpdCgksFsrksnL 16 
                       + C++C+k+F+r  n+
  Pd.00g179770.m01 106 FACSICSKTFNRYNNM 121
                       78********997765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    
MQCLPLLSQF TDTKPVKIED VGVQKEGFGV KEEKMGQVTV ALRIGLPDST SEADQSDTHH  60
ENKKVLDLKE EEGVAMKKSF HGCSFNAESR FWIPTPAQIL VGPMQFACSI CSKTFNRYNN  120
MQPGTDLLLN PCNLWNLPLN HHGLLLQLAP LLAPFFYFLS SAASRSRSAT CQVSATFATL  180
PSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08290.11e-23C2H2 family protein