PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g182420.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 237aa    MW: 26236.1 Da    PI: 9.3196
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g182420.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.61.9e-31160217359
                       -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       D+y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+ +dp ++++tYegeH+h 
  Pd.00g182420.m01 160 DEYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERAPDDPAMLIVTYEGEHRHA 217
                       9************************9888****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MANSVNDKSI ESLISASKSL RLSLQKSQGL GSALEKAGNR FEEINQRLPS LEAAVRPIRA  60
DKEALAAVGG HINRAVGPAA AVLKVFDAVH GLEKSLLSDP RSDLRGYLSV LKRLEEALRF  120
LGDNCGLAIQ WLEDIVEKNR VKKTIRVPAI SSKIADIPPD EYSWRKYGQK PIKGSPYPRG  180
YYKCSTVRGC PARKHVERAP DDPAMLIVTY EGEHRHAPEN VGLVFECGFD VNFYFFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.25e-51WRKY family protein