PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g183770.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 186aa MW: 21513.6 Da PI: 9.1888

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g183770.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.7	1e-05	25	44	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ Pd.00g183770.m01 25 FSCPVCYKTFNRYNNMQMHM 44 89*****************9 PP
2	zf-C2H2	15.7	4.3e-05	109	131	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ Pd.00g183770.m01 109 FMCRKCGKAFAVRGDWRTHEKNC 131 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
MSCRLNKGQY WIPTPSQILI GPTQFSCPVC YKTFNRYNNM QMHMWGHGSQ YRKGPESLRG 60 TQPTGMLRLP CYCCTPGCRN NIDHPRAKPL KDFRTLQTHY KRKHGIKPFM CRKCGKAFAV 120 RGDWRTHEKN CGKLWYCICG SDFKHKRSLK DHIKAFGNGH AAYGIDGFEE EDDPASEVEQ 180 DNESMQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-135	C2H2 family protein