PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g192340.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YA
Protein Properties Length: 327aa    MW: 36321.7 Da    PI: 9.0748
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g192340.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.71.7e-32170226158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       d p+YVNaKQy++Il+RRq+Rakle+++kl  k+rkpylheSRh hAl+R RgsgGrF
  Pd.00g192340.m02 170 DGPIYVNAKQYHGILRRRQSRAKLEAQNKL-LKARKPYLHESRHLHALNRVRGSGGRF 226
                       57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MPTQNLDKKF FSQSSVQSIP LYTSNCISWN PIEREIPQSS SKDASFKVEF TPQVRHDAKH  60
LGLQLLPDQG SSSTTQTISQ SQDRCNSSES GEDEICGKGV EGQMKPVYLL NNLDLMSNPS  120
QVGYGNLMGR VPYPYADPYF SGFLAAYGPQ AMPQMIAPTR VPLPLDLAED GPIYVNAKQY  180
HGILRRRQSR AKLEAQNKLL KARKPYLHES RHLHALNRVR GSGGRFLSTK RLQQSDQNPS  240
SSTHDVLDSV NLHQKDTQDT ESHHLGSSEF VTAVATHSDI ASVSHTNDIF RQQDRRFSGI  300
PSHMGGAMQF RGGLMRAGTQ HCASVVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.11e-51NF-YA family protein