PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g193350.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 323aa MW: 36055.4 Da PI: 7.5457

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g193350.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49	1.4e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed+ l +++k++G g+W+ +++ g++R++k+c++rw++yl Pd.00g193350.m01 14 KGAWTAHEDKVLSEYIKLHGEGRWRNLPKKAGLKRCGKSCRLRWLNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.1	7.2e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +++E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ Pd.00g193350.m01 67 RGNISPDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 7899****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MGRSACCAKE GLNKGAWTAH EDKVLSEYIK LHGEGRWRNL PKKAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SPDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLGKKILDQQ 120 RQGSASNLKH RNKNGEPVSK KAKTMEDMSP NMTSPSPSKM PPVVRTKAAK CTKVFINPDP 180 HKLPLGHQHC EENNRGGLML DRHAGDDHTN NGSSSLSSFS NIADQENSSS DFLVDFDMNE 240 ISLASLLNSD FPAINCDNVD QNGDNSLSRC VDQTAQIFSE EMLQHLNGGS HDCVQVQPNL 300 VLNFHSLTSF LDGDQGGEEW LGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	2e-61	MYB family protein