PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g196780.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 196aa    MW: 22364.5 Da    PI: 10.2628
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g196780.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.57.3e-1110723599
                      EEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--.TT-EEEEEE-SSSEE..EEEEE-S CS
                B3 35 tltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLk.egDfvvFkldgrsefelvvkvfrk 99
                       l+l+d+s  sW+v++   k++++ +++++GW+eF k+n L  +++++ + ++g++ f   v++f k
  Pd.00g196780.m01 10 ILKLKDSSDSSWTVTV--HKTREGaVYFKNGWEEFIKDNSLGtDNEMLQLFYEGKMHF--SVRIFGK 72
                      689*************..5555555****************97788888888887888..8888866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MLKDLSERAI LKLKDSSDSS WTVTVHKTRE GAVYFKNGWE EFIKDNSLGT DNEMLQLFYE  60
GKMHFSVRIF GKNGIERSEE LSSSEEEEED SEDNTSEDLE ADFTKIGSLH NSLAKNTTKR  120
PRGRPRKYPV KNFQVSKKRR KILKTAHLRI WKVLSLKLSN LTSLILKASS DKLNVSSSPQ  180
PSLGSIFLKA KVLRLS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119127KRPRGRPRK
2137141KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16210.26e-10B3 family protein