PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g196780.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 272aa    MW: 31104.8 Da    PI: 6.0126
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g196780.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.71.4e-1010723599
                      EEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--.TT-EEEEEE-SSSEE..EEEEE-S CS
                B3 35 tltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLk.egDfvvFkldgrsefelvvkvfrk 99
                       l+l+d+s  sW+v++   k++++ +++++GW+eF k+n L  +++++ + ++g++ f   v++f k
  Pd.00g196780.m02 10 ILKLKDSSDSSWTVTV--HKTREGaVYFKNGWEEFIKDNSLGtDNEMLQLFYEGKMHF--SVRIFGK 72
                      689*************..5555555****************97788888888887888..8888765 PP
2B357.52.5e-181922711699
                       EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                         +p  f +eh  ++ ++++ +l++ +g +W+v++ + ++++++ +++GW +Fv+an++++gD+++F+l +  + +++v+++rk
  Pd.00g196780.m02 192 QFIPTAFSREHF-PQGKGFKAILKNAEGGKWTVNC-IPNSPQSHNFSAGWYKFVSANQIRVGDTCIFELLS--RYQMMVHILRK 271
                       579********4.346799****************.6999999*************************876..55569999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MLKDLSERAI LKLKDSSDSS WTVTVHKTRE GAVYFKNGWE EFIKDNSLGT DNEMLQLFYE  60
GKMHFSVRIF GKNGIERSEE LSSSEEEEED SEDNTSEDLE ADFTKIGSLH NSLAKNTTKR  120
PRGRPRKYPV SSSKPRPLKS CKVESGEELS SIKEEEEDSE DSTSEDLEGV EPEAFKSNFP  180
YFKGIIRQTK CQFIPTAFSR EHFPQGKGFK AILKNAEGGK WTVNCIPNSP QSHNFSAGWY  240
KFVSANQIRV GDTCIFELLS RYQMMVHILR KR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1119127KRPRGRPRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16210.22e-09B3 family protein