PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g198810.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 255aa    MW: 29144.7 Da    PI: 5.5214
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g198810.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM154.16.1e-4841351128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                       lppG+rF Pt+eelv++yL +k+egk+ ++ +vi+ vdiy+ ePwdLpk     +++++++w+fF++r++++a+g r+nr+t+sgyWkatg+ 
  Pd.00g198810.m01   4 LPPGYRFYPTEEELVSFYLLNKLEGKRDDTRRVIPVVDIYSKEPWDLPKfsgeLCHGDTEQWFFFTPRQQREAQGGRPNRTTASGYWKATGSP 96 
                       79****************************99****************656754445777********************************* PP

               NAM  90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         v+s++++++g+kkt+vfykg+ap+g+kt+W m+eyr+
  Pd.00g198810.m01  97 GYVYSSDNKVIGMKKTMVFYKGKAPTGRKTKWKMNEYRA 135
                       *************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MEELPPGYRF YPTEEELVSF YLLNKLEGKR DDTRRVIPVV DIYSKEPWDL PKFSGELCHG  60
DTEQWFFFTP RQQREAQGGR PNRTTASGYW KATGSPGYVY SSDNKVIGMK KTMVFYKGKA  120
PTGRKTKWKM NEYRAIEADN PTTTTTTTSV PKYLRNEFRL CRVYVVSGSC RAFDRRPLEG  180
GGETKHQLSE SMGETSTFSL KAPVVEKASS SDETYSYSGE LGDLPETFAG INSTSWEIIE  240
GLEQPLWEWE QLNLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.12e-90NAC family protein