PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g199320.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 188aa    MW: 21622.5 Da    PI: 8.1564
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g199320.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.21.6e-12106147446
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       W ++++ ll++a +++G g+W+ +a+++g +++ +qc++++ +
  Pd.00g199320.m01 106 WNADDEILLLEATEMYGLGNWAEVAEHVG-TKSKEQCIEHYTN 147
                       *****************************.***********88 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MDRSRGNFHS DEDPTQRSRR KKKASTGEKL ESSAAGQGIS EGKRAYHCNY CNKDITGKIR  60
IKCCMCPDFD LCIECFSVGA ELTSHKSNHS YRVMDNLSFP LICPDWNADD EILLLEATEM  120
YGLGNWAEVA EHVGTKSKEQ CIEHYTNVYL NSQRFPIPDM RGKIERSFLL WLKGMERTRK  180
PNRSTKHH