PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g202700.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 284aa MW: 32803.2 Da PI: 8.3865

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g202700.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.7	6e-21	63	156	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHel 89 ++Y+e+Ak++GFs+r+++++ + + t+r fvC + g++ ++++++k +r+r+++r+gC+a ++++k++ +w+vt + ++HnHel Pd.00g202700.m01 63 EYYSEFAKQCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPIKTSHERKPQRNRKSSRCGCQAYMRISKTTelgAPEWRVTGFANHHNHEL 155 69***********9998877356667999*********99999999***************99888889***********9 PP FAR1 90 a 90 Pd.00g202700.m01 156 L 156 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MMSEDAGVML VVYDDPSDQR SLSLDETSST EESPDETRLS LETTNDVIPY IGQRFSTHDA 60 AYEYYSEFAK QCGFSIRRHR TEGKDGVGKG LTRRYFVCHR AGNTPIKTSH ERKPQRNRKS 120 SRCGCQAYMR ISKTTELGAP EWRVTGFANH HNHELLEANQ VRFLPAYRTI SESDKSRILM 180 FAKTGISVQQ MMRLMELEKC VQPGYLPFTE KDIIEDFQKC HVDHPIGKFF GECTDLKIKL 240 DRCFRQEKAV KRKVNFEESK KLKERLQALR KETAEISTEN PVQA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	251	263	KRKVNFEESKKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	1e-119	FAR1 family protein