PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g202800.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 425aa MW: 47165.1 Da PI: 4.3454

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g202800.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	80.7	3.2e-25	9	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 +p Gf+F+P+d+el+ +yL +kv+g++++ +++++e+++y k ePwd+ + + ++ +++yfF+k + + +g+r r++ +g+Wk k Pd.00g202800.m01 9 VPIGFKFRPSDDELLRYYLLNKVSGTPFKYNNIVPEFNLYgKKEPWDIWNdfggQNLEKGEDLYFFTKLKLVTGKGSRVARTIGNGTWKGEDK 101 589*************************999*99456*753444333356789**********************9999 PP NAM 89 dkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++v + k++ gl k + + ++++ ++ W+mhey+l Pd.00g202800.m01 102 GTTVRDPakKNTPLGLCKRFRYE--NEKSDQHGCWIMHEYSL 141 999998865666799999998..44455699*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MAPCEYVDVP IGFKFRPSDD ELLRYYLLNK VSGTPFKYNN IVPEFNLYGK KEPWDIWNDF 60 GGQNLEKGED LYFFTKLKLV TGKGSRVART IGNGTWKGED KGTTVRDPAK KNTPLGLCKR 120 FRYENEKSDQ HGCWIMHEYS LHPSLVKPQS NSNTCGCDGK YVLCRIRKND RKRKLSENDG 180 VGGHALILQS PTKILRQLES SDEVVLGANS TPISEASEVT NHYNQQPEQT TTANAYLPMD 240 QPHYFLTDYP TTMASASTSP PPSLPQPDYG FELISDTDHQ PAQGAGFNYD LSQFLDSDDV 300 DALLKDLSNL DNIQPLTAQP LGGGSHPYPC IIEESAVDED SGNINTGLGI SSEDQTGGEL 360 GTENVSLNVS GFPVHDDEMP DFLNRASFDD LVDMIQFEDN DDELQAFAKS ESVMGMESTT 420 TATTY

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MAPCEYVDVP IGFKFRPSDD ELLRYYLLNK VSGTPFKYNN IVPEFNLYGK KEPWDIWNDF  60
GGQNLEKGED LYFFTKLKLV TGKGSRVART IGNGTWKGED KGTTVRDPAK KNTPLGLCKR  120
FRYENEKSDQ HGCWIMHEYS LHPSLVKPQS NSNTCGCDGK YVLCRIRKND RKRKLSENDG  180
VGGHALILQS PTKILRQLES SDEVVLGANS TPISEASEVT NHYNQQPEQT TTANAYLPMD  240
QPHYFLTDYP TTMASASTSP PPSLPQPDYG FELISDTDHQ PAQGAGFNYD LSQFLDSDDV  300
DALLKDLSNL DNIQPLTAQP LGGGSHPYPC IIEESAVDED SGNINTGLGI SSEDQTGGEL  360
GTENVSLNVS GFPVHDDEMP DFLNRASFDD LVDMIQFEDN DDELQAFAKS ESVMGMESTT  420
TATTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17260.1	3e-20	NAC family protein