PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g203760.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SRS

Protein Properties

Length: 231aa MW: 25663.9 Da PI: 8.7218

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g203760.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	192.7	1.2e-59	13	156	5	154
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaesk 97 +++CqdCGnqakk+C+++RCRtCCks+gf+C+thvkstWvp+++rr++q aa ++ + ++++ +++++ + +++ + +s++++ Pd.00g203760.m01 13 ASRCQDCGNQAKKECVYMRCRTCCKSKGFHCQTHVKSTWVPVYRRRQQQL-PGAAIPQQHLQLHHEQGHHHQN----PKRPAEHLTNPSSSTR 100 569****************************************98544.4444344433333333333332....3333344444444444 PP DUF702 98 keletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 + ++P+ev+s+a f+cvrvssv+d ++ aYqt+v igGhvfkGiL dqG+++ Pd.00g203760.m01 101 -LDQEMNFPAEVNSMATFKCVRVSSVEDMVDQHAYQTSVVIGGHVFKGILCDQGPDH 156 .455566**********************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MVKRGGEGGV IMASRCQDCG NQAKKECVYM RCRTCCKSKG FHCQTHVKST WVPVYRRRQQ 60 QLPGAAIPQQ HLQLHHEQGH HHQNPKRPAE HLTNPSSSTR LDQEMNFPAE VNSMATFKCV 120 RVSSVEDMVD QHAYQTSVVI GGHVFKGILC DQGPDHHHQN CYTTVGQSSS SHHVLLNRKT 180 SNSINAAANT ASTSSAPDPA DQVPHHHPPS SYPLIPFNAF MPGTQFFINP K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G51060.1	4e-47	SRS family protein