PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g204430.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 420aa    MW: 47862.4 Da    PI: 8.5853
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g204430.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.86.3e-171422752128
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiy..kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWka 85 
                       p GfrF+Ptd+e+v  +L+  + ++k    + +++i+ +d++  k+eP+++ +k+ +    ++++yf s  +k ++  kr  r + + g+W++
  Pd.00g204430.m01 142 PLGFRFQPTDQEIVGSFLHTLLVERKplmPPYSNFIRACDLFgkKLEPSEIWNKYGGpqlVDQDLYFLSGLKKLTP--KRMDRsIGNGGTWSE 232
                       89******************988877787666778*****974478*****7544333335668888888877655..68888566799**** PP

               NAM  86 tgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       t + k + +   +++ +g k+ + + +  + + e+t W+++ey+l
  Pd.00g204430.m01 233 TESFKLIEDDngNQNPIGRKRKFRYEN--KGSEEHTWWLLDEYSL 275
                       *******999555666********984..334469********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    
MTATSRMNFD LYDFKKLRWK SGIPATQSTP KPQSNKSSSL LHLLSRIKSI GSTMNLPCQP  60
SKNFSSVSKL GFFIRVLKIK KKVCEVLFHI SLDCGHLLRF CSSAGPSLPI SRSVPIQAPS  120
KQAILFLISS SKQAMAHHHN VPLGFRFQPT DQEIVGSFLH TLLVERKPLM PPYSNFIRAC  180
DLFGKKLEPS EIWNKYGGPQ LVDQDLYFLS GLKKLTPKRM DRSIGNGGTW SETESFKLIE  240
DDNGNQNPIG RKRKFRYENK GSEEHTWWLL DEYSLFVGPK DDYNDRCYDF DFVICRMRKN  300
DRASSKEINL KRSSQDQVQK KRSTNKKMKK DHQMGSTEES SSHVQQGYSS SITGGELVVS  360
DDNVDTIDLT FFEDNPSFNI EQILCETKVE DACSPSNSEN VDSSYCKWTE SYMEELMACI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01520.14e-08NAC family protein