PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g205930.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 491aa MW: 54970 Da PI: 4.6643

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g205930.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	80.6	3.3e-25	62	180	13	128
NAM 13 elvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 +l +++Lk+ ++gk + i+e+d+yk+ePwdL + + + w+ Fs+ + kya++ r nrat +g+Wk tgk ++v+s+ +++ Pd.00g205930.m01 62 QLCCRFLKRMMQGKASQS---IPEIDVYKYEPWDLAElmfpDSPYQPRAWFSFSRPEYKYANSPRCNRATGKGFWKITGKPRQVKSRqlPKSV 151 68899******99666...**********8444553333778**********************************8665666 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 + k+tL+f++gr +k+++t Wv +ey l Pd.00g205930.m01 152 TCKKRTLTFHEGRVSKSRNTGWVRQEYYL 180 77889********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence
MSRSMSTTEE SVLDLLPKFR FHPSEEEMVN LLKNKVEGQH SQAMPDEIVD KPWDLPDNES 60 IQLCCRFLKR MMQGKASQSI PEIDVYKYEP WDLAELMFPD SPYQPRAWFS FSRPEYKYAN 120 SPRCNRATGK GFWKITGKPR QVKSRQLPKS VTCKKRTLTF HEGRVSKSRN TGWVRQEYYL 180 TPTDPGSNPN QLSGFVLCRM KNKSTDNESD NKKQQDVSIC VESVDPGISG CMASNSELDQ 240 AAGIHLIPES EEHLTHKELE HVLLGSGNQN DGEPGGFVSS DFDDMIQEQL CAKGGECLDS 300 PSPPERPHQH QLPQLGNVPV TGDYIGSNSN NQAAAIHHMI PQPEDFLAYK ELEHVLGTCN 360 PDAGEPGGCV SSNMLQKQWQ LCAQLGEELD SPIPPPGPPE LGNAPYVYTD ECSSWPSPIG 420 DNDSSLPNKN SIPTNYDSKP VSNTASNFEN QTRISEVYSQ AEENLESFFR QFELEGDFLH 480 ANNYIGCNES Q

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence

MSRSMSTTEE SVLDLLPKFR FHPSEEEMVN LLKNKVEGQH SQAMPDEIVD KPWDLPDNES  60
IQLCCRFLKR MMQGKASQSI PEIDVYKYEP WDLAELMFPD SPYQPRAWFS FSRPEYKYAN  120
SPRCNRATGK GFWKITGKPR QVKSRQLPKS VTCKKRTLTF HEGRVSKSRN TGWVRQEYYL  180
TPTDPGSNPN QLSGFVLCRM KNKSTDNESD NKKQQDVSIC VESVDPGISG CMASNSELDQ  240
AAGIHLIPES EEHLTHKELE HVLLGSGNQN DGEPGGFVSS DFDDMIQEQL CAKGGECLDS  300
PSPPERPHQH QLPQLGNVPV TGDYIGSNSN NQAAAIHHMI PQPEDFLAYK ELEHVLGTCN  360
PDAGEPGGCV SSNMLQKQWQ LCAQLGEELD SPIPPPGPPE LGNAPYVYTD ECSSWPSPIG  420
DNDSSLPNKN SIPTNYDSKP VSNTASNFEN QTRISEVYSQ AEENLESFFR QFELEGDFLH  480
ANNYIGCNES Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	8e-30	NAC family protein