PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g205930.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 490aa MW: 54841.9 Da PI: 4.6643

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g205930.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	80.6	3.3e-25	62	180	13	128
NAM 13 elvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 +l +++Lk+ ++gk + i+e+d+yk+ePwdL + + + w+ Fs+ + kya++ r nrat +g+Wk tgk ++v+s+ +++ Pd.00g205930.m02 62 QLCCRFLKRMMQGKASQS---IPEIDVYKYEPWDLAElmfpDSPYQPRAWFSFSRPEYKYANSPRCNRATGKGFWKITGKPRQVKSRqlPKSV 151 68899******99666...**********8444553333778**********************************8665666 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 + k+tL+f++gr +k+++t Wv +ey l Pd.00g205930.m02 152 TCKKRTLTFHEGRVSKSRNTGWVRQEYYL 180 77889********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 490 aa Download sequence
MSRSMSTTEE SVLDLLPKFR FHPSEEEMVN LLKNKVEGQH SQAMPDEIVD KPWDLPDNES 60 IQLCCRFLKR MMQGKASQSI PEIDVYKYEP WDLAELMFPD SPYQPRAWFS FSRPEYKYAN 120 SPRCNRATGK GFWKITGKPR QVKSRQLPKS VTCKKRTLTF HEGRVSKSRN TGWVRQEYYL 180 TPTDPGSNPN QLSGFVLCRM KNKSTDNESD NKKQQDVSIC VESVDPGISG CMASNSELDQ 240 AAGIHLIPES EEHLTHKELE HVLLGSGNQN DGEPGGFVSS DFDDMIQELC AKGGECLDSP 300 SPPERPHQHQ LPQLGNVPVT GDYIGSNSNN QAAAIHHMIP QPEDFLAYKE LEHVLGTCNP 360 DAGEPGGCVS SNMLQKQWQL CAQLGEELDS PIPPPGPPEL GNAPYVYTDE CSSWPSPIGD 420 NDSSLPNKNS IPTNYDSKPV SNTASNFENQ TRISEVYSQA EENLESFFRQ FELEGDFLHA 480 NNYIGCNESQ

Sequence ? help Back to Top

Protein Sequence Length: 490 aa Download sequence

MSRSMSTTEE SVLDLLPKFR FHPSEEEMVN LLKNKVEGQH SQAMPDEIVD KPWDLPDNES  60
IQLCCRFLKR MMQGKASQSI PEIDVYKYEP WDLAELMFPD SPYQPRAWFS FSRPEYKYAN  120
SPRCNRATGK GFWKITGKPR QVKSRQLPKS VTCKKRTLTF HEGRVSKSRN TGWVRQEYYL  180
TPTDPGSNPN QLSGFVLCRM KNKSTDNESD NKKQQDVSIC VESVDPGISG CMASNSELDQ  240
AAGIHLIPES EEHLTHKELE HVLLGSGNQN DGEPGGFVSS DFDDMIQELC AKGGECLDSP  300
SPPERPHQHQ LPQLGNVPVT GDYIGSNSNN QAAAIHHMIP QPEDFLAYKE LEHVLGTCNP  360
DAGEPGGCVS SNMLQKQWQL CAQLGEELDS PIPPPGPPEL GNAPYVYTDE CSSWPSPIGD  420
NDSSLPNKNS IPTNYDSKPV SNTASNFENQ TRISEVYSQA EENLESFFRQ FELEGDFLHA  480
NNYIGCNESQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	9e-30	NAC family protein