PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g207410.m02
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MIKC_MADS
Protein Properties Length: 206aa    MW: 23588.1 Da    PI: 10.4509
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g207410.m02genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF862.2e-27959151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      k+i+n++ rqvtfskRr g++KKA+ELS+LCdae+a+++fs tgkl+e+ s
  Pd.00g207410.m02  9 KKIDNTTARQVTFSKRRRGLFKKAQELSTLCDAEIALVVFSATGKLFEFTS 59
                      68***********************************************75 PP
2K-box52.42.3e-18691521497
             K-box  14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                        +  +  +a L+kei +  +e+R+l+Ge+L++L++keLq+Le+ L ++l+++R+ K e++l++i  l+ k  ++ +enk+L+++
  Pd.00g207410.m02  69 LQLESSTSAALRKEIAENTHELRKLMGEELQELNMKELQELEKLLGSGLRRVRDAKGEIVLKEITSLKWKGSQMIQENKRLKQM 152
                       5666777899*******9***************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MTRRKIQIKK IDNTTARQVT FSKRRRGLFK KAQELSTLCD AEIALVVFSA TGKLFEFTSS  60
RLNQPSLELQ LESSTSAALR KEIAENTHEL RKLMGEELQE LNMKELQELE KLLGSGLRRV  120
RDAKGEIVLK EITSLKWKGS QMIQENKRLK QMANRQVQTL ELERGQSFEP IGDFIHSDPS  180
QDHDSSDTSL KLGLAFPNRI RQMKSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.11e-59MIKC_MADS family protein