PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g207730.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 667aa MW: 70784.9 Da PI: 4.2645

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g207730.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	23.6	1.4e-07	164	203	90	128
NAM 90 kevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +e++++ +++++g k++L f +gr p+++kt+ vmhey+l Pd.00g207730.m01 164 REIKAEqSQAVIGNKRILPFCEGRGPQAKKTKYVMHEYSL 203 455554366779**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 667 aa Download sequence
MEEEARVSGH TGTGTGNGSE AIRDSSYWLD ACEDISCDVI GDLVDFCDAP VGGPPVLANG 60 NGCSQEEDGL VSDFFGGIDH ILDSIKSGAG LPGVIDPNLN ANANGVIGNA AVEGCFQMEA 120 SGVSKTVEVN GSVGLNGETG GRNLDIANGD TKGDRNGYXX XXVREIKAEQ SQAVIGNKRI 180 LPFCEGRGPQ AKKTKYVMHE YSLTKTGLAK LGVGPNPNQK EEFVLCCLKN KSANSKKLKD 240 VSICSNELAE PAIGGEIASN AEDDHAAATH MIQGPDEHLT DKDVLLGTDN RNECAESESP 300 NGFSPTDKND ISTCVGSPGS FDVPGGFFLS DFDDLFKEPS CADLGENMDS TFLPPEQLAA 360 TSATTPTSAT SFGGLGVGSP DGFLLSDIDD LLKEPSCADL GENMDSTFLP PEQLAATSAT 420 TPTSAISFGG FGVGSPDGFL LSDIDDLLKK PFCADQPHQP PHPPLPHQPP PSPQPHQPPS 480 PSQLQNYCFS TLPSALCTKQ GNVPCLYNDD CSRQLSPTGN PPHPHQPPPK PHPHQPPPPS 540 QPQNYCSSTL PSALCTKQGN VPSLYNDDCS KQLSPTGNNI STNYHHEPVS NTAYGVQNGA 600 TDERFSEVYK ISTNDHNESV SSEACFQPEE NLGILHPFRP QDYTLLSPRN TELGDVMHAN 660 NYIDMQW

Sequence ? help Back to Top

Protein Sequence Length: 667 aa Download sequence

MEEEARVSGH TGTGTGNGSE AIRDSSYWLD ACEDISCDVI GDLVDFCDAP VGGPPVLANG  60
NGCSQEEDGL VSDFFGGIDH ILDSIKSGAG LPGVIDPNLN ANANGVIGNA AVEGCFQMEA  120
SGVSKTVEVN GSVGLNGETG GRNLDIANGD TKGDRNGYXX XXVREIKAEQ SQAVIGNKRI  180
LPFCEGRGPQ AKKTKYVMHE YSLTKTGLAK LGVGPNPNQK EEFVLCCLKN KSANSKKLKD  240
VSICSNELAE PAIGGEIASN AEDDHAAATH MIQGPDEHLT DKDVLLGTDN RNECAESESP  300
NGFSPTDKND ISTCVGSPGS FDVPGGFFLS DFDDLFKEPS CADLGENMDS TFLPPEQLAA  360
TSATTPTSAT SFGGLGVGSP DGFLLSDIDD LLKEPSCADL GENMDSTFLP PEQLAATSAT  420
TPTSAISFGG FGVGSPDGFL LSDIDDLLKK PFCADQPHQP PHPPLPHQPP PSPQPHQPPS  480
PSQLQNYCFS TLPSALCTKQ GNVPCLYNDD CSRQLSPTGN PPHPHQPPPK PHPHQPPPPS  540
QPQNYCSSTL PSALCTKQGN VPSLYNDDCS KQLSPTGNNI STNYHHEPVS NTAYGVQNGA  600
TDERFSEVYK ISTNDHNESV SSEACFQPEE NLGILHPFRP QDYTLLSPRN TELGDVMHAN  660
NYIDMQW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G33060.1	1e-06	NAC family protein