PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g207780.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 424aa    MW: 47430.3 Da    PI: 6.3666
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g207780.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM94.51.7e-29181381128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       l pG++F+Ptd+el+++yLkkk++g++ e++++i+e+++ ++eP+dLp          +fFs+ d  +++g+   r+t++g+ k+tgk +e+ 
  Pd.00g207780.m01  18 LLPGIKFSPTDKELLSFYLKKKIAGEDSEFSNIIPEINLREHEPHDLP--------TEFFFSEPDYMSPSGDSCYRTTNKGFYKSTGKPREIE 102
                       579***************************999**************9........359********************************** PP

               NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++ +++++g k+ + fy+grapk + t+ v+h+++l
  Pd.00g207780.m01 103 DElSKAVIGEKRYMPFYEGRAPKHKPTEYVLHQFSL 138
                       9988899***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    
MGSGGGTTDE RVSVPMGLLP GIKFSPTDKE LLSFYLKKKI AGEDSEFSNI IPEINLREHE  60
PHDLPTEFFF SEPDYMSPSG DSCYRTTNKG FYKSTGKPRE IEDELSKAVI GEKRYMPFYE  120
GRAPKHKPTE YVLHQFSLTK TELAKLAPNR EFVLNHLTIK KGSTKAHNPK PNYKKRKYDS  180
NCDKLAEHGI PGYIASNYED DQAAAAANMI PEPEEHLADE DVLLGSENRN ECVESESANG  240
SRLINNNDSS TLAVGSPGGC FPSGYGNVAA YDPFREVSFQ PEGNLISPFH PSSLRDIPLR  300
NNMHYTFSDS DLLQPLGGVY DSYSGVGRQT TQVKYVLVLS AIAQHSQVLE TSNLLSEHEN  360
HRQVLMFEMP FGTLLFSDET HIPQYQPASI HVFTHGRCSK KNPTAKLYHR TRLGMLQSIV  420
LLFI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1169177PKPNYKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.12e-26NAC family protein