PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g207840.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 346aa    MW: 38647.4 Da    PI: 8.2651
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g207840.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.51.7e-1695185172
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...................tekerrtraetrtgCkaklkvkkek 72 
                       +fY+eYAk+vGF  ++++s++s+ +g++++++f C+++g+++e++++                   +++ r +r+ ++t+Cka+++vk++ 
  Pd.00g207840.m01  95 SFYREYAKSVGFAAVIKASRRSRVSGKFIDAKFACTRYGNKRESSTAevpesvsnsressicssvkRKRGRASRSWEKTDCKACMHVKRNF 185
                       5*****************************************999999***************998888899****************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MGIDLEQPSG EYHKEDNRPS VNNIVDGRGE ENHRAIVSVT NGPVNDKENA GQNVNGRVSD  60
TRNKTVTRDE INLNSSRDSE PRDGMEFESK EEAFSFYREY AKSVGFAAVI KASRRSRVSG  120
KFIDAKFACT RYGNKRESST AEVPESVSNS RESSICSSVK RKRGRASRSW EKTDCKACMH  180
VKRNFDLGTG DADGLHAIRR RTKKMYVNMA RQSGGYKKSD NQKEFGMEGI VSTKGDVYSF  240
GIVLMETFTR KRPTDEMFVG EMTLKQWIAN SLLPDAAIVE VVDADLLGTE EDGDFVSRRD  300
CLSSIMILAL ASCAELPEER INMQEALVTL NKIKIKFLKD CGGVRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G19990.12e-31FAR1 family protein