PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g208290.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 191aa    MW: 22521.3 Da    PI: 5.4532
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g208290.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.31.1e-1751373128
               NAM   3 pGfrFhPtdeelvveyLkkkvegkk.....leleevikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWk 84 
                        GfrF+Ptd+e++ ++L k v +++      + ++vi+++++  +k eP+++ + + +   +++++yf s+ +++   g r +  + + g+W+
  Pd.00g208290.m01   5 LGFRFDPTDQEIIGFFLYKMVVTNNpltsmPPYNKVIHKCNLfgNKREPSEIWRDYGGdqlDDQDLYFVSELQRN---GLRIQTkTGRCGTWS 94 
                       6*******************9888878886566678****9833577*****75333222366688888888775...44544414568**** PP

               NAM  85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +t + ++v+++ +e +g k  + + +g++++  ++ W+++ey+l
  Pd.00g208290.m01  95 ETETYQDVKDEVDEIIGRKGKFRYENGNTSE-DHAGWLLDEYSL 137
                       ***********99***********9988888.89********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MTQLLGFRFD PTDQEIIGFF LYKMVVTNNP LTSMPPYNKV IHKCNLFGNK REPSEIWRDY  60
GGDQLDDQDL YFVSELQRNG LRIQTKTGRC GTWSETETYQ DVKDEVDEII GRKGKFRYEN  120
GNTSEDHAGW LLDEYSLFEK GCKNRTSRNC YDFDVVICRL RRKCNMDGQV REKEEVLISR  180
SIKQEDEKRS I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10490.13e-06NAC family protein