PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g208390.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 439aa MW: 47908.9 Da PI: 5.5804

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g208390.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	38.4	3e-12	123	163	10	55
AP2 10 kkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g Pd.00g208390.m01 123 RRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 163 479*******......55**********************997 PP
2	AP2	40.2	8.2e-13	206	256	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a+ k +g Pd.00g208390.m01 206 SRYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEVEAARAYDKAAIKCNG 256 79******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MLDLNLNVVG SGPNDVESCG TQMDESGTSN SSVVNADASS TNDDSCSTRA ARYDAVTTFN 60 FDILKVRGRE DEEDDVVVTK ELFPVTGALS KWPGQGQSPA SSSLVRKNLM ELGFDHGGSG 120 EVRRTGRWES HIWDCGKQVY LGGFDTAHAA ARAYDRAAIK FRGVDADINY NLSDYEEDLK 180 QMKNLTKEEF VHILRRQSTG FSRGSSRYRG VTLHKCGRWE ARMGQFLGKK YIYLGLFDSE 240 VEAARAYDKA AIKCNGREAV TNFEPSTYEG EMISEAGNED GDHNLDLNLG ISPPSFGNCQ 300 KEVEGHLQFH SGPYDGHNGN RMEHNVNATM SDPPFKGLVM TSQHPPLWNG VYPSYFSNQE 360 RATEKRIALG SQGPPNWAWQ MHGQVSATPM PLFSTAASSG FSFSATAPSA AVHPLQPSTP 420 TALNLCFTSP ATAAANTSQ

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MLDLNLNVVG SGPNDVESCG TQMDESGTSN SSVVNADASS TNDDSCSTRA ARYDAVTTFN  60
FDILKVRGRE DEEDDVVVTK ELFPVTGALS KWPGQGQSPA SSSLVRKNLM ELGFDHGGSG  120
EVRRTGRWES HIWDCGKQVY LGGFDTAHAA ARAYDRAAIK FRGVDADINY NLSDYEEDLK  180
QMKNLTKEEF VHILRRQSTG FSRGSSRYRG VTLHKCGRWE ARMGQFLGKK YIYLGLFDSE  240
VEAARAYDKA AIKCNGREAV TNFEPSTYEG EMISEAGNED GDHNLDLNLG ISPPSFGNCQ  300
KEVEGHLQFH SGPYDGHNGN RMEHNVNATM SDPPFKGLVM TSQHPPLWNG VYPSYFSNQE  360
RATEKRIALG SQGPPNWAWQ MHGQVSATPM PLFSTAASSG FSFSATAPSA AVHPLQPSTP  420
TALNLCFTSP ATAAANTSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.3	1e-109	AP2 family protein