PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g208670.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 285aa    MW: 32525 Da    PI: 7.1889
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g208670.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.000223761123
                      EEETTTTEEESSHHHHHHHHHH..T CS
           zf-C2H2  1 ykCpdCgksFsrksnLkrHirt..H 23
                      ykC  C k ++ k++L+ Hi++  H
  Pd.00g208670.m01 37 YKCAACYKLYKKKEHLVEHINVsfH 61
                      9*******************97555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MALLSAALGS MDLEPEFPKT TNTTISLCVS HNFCNLYKCA ACYKLYKKKE HLVEHINVSF  60
HSVHQPRCGV CKGTSNLLNH RRSVSLDHWQ KKIARGFSLN KGTTMEPCEE FKYDINSSKE  120
NHIGDGTEAI ALDCEMVAGG SDGSLPVCKD ETILFHTYVQ PQDPVIHYRD TASYHPLMKT  180
NLVSHPLKYL TRTYLGYDIQ SGFHDPYEDC VSAMRLYKRF RGLDQQKEGN VASLATMRAK  240
DIPGSFDSWE TDKLEKMTLD ELYEMSRPNY KRWCLDSVQA MQPHH