PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g209510.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 118aa    MW: 13754.8 Da    PI: 7.9607
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g209510.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.61.7e-11595189
                      EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
                B3  1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgrs 88
                      f+k lt  dv ++  + lp + ++      +g+   ++ l+++d  g  We+ +++r+ ++    ++ ++GW +Fv+ +gLk+gD +v++ + + 
  Pd.00g209510.m01  5 FEKCLTETDVVSR--FALPISWLSVLprieQGS--HEVHLQVTDGFGFFWEFCCSIRRMGRYrklVLQSEGWLKFVNHKGLKVGDKIVLESEAN- 94
                      8999999999987..699999996665543222..334566666666*******8844433345355569********************5543. PP

                      E CS
                B3 89 e 89
                      +
  Pd.00g209510.m01 95 D 95
                      3 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
MAASFEKCLT ETDVVSRFAL PISWLSVLPR IEQGSHEVHL QVTDGFGFFW EFCCSIRRMG  60
RYRKLVLQSE GWLKFVNHKG LKVGDKIVLE SEANDFRGTQ FRIRAEKLNK ECDQWLDV