PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g209620.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 118aa    MW: 13800.8 Da    PI: 7.0421
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g209620.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.14.1e-10898290
                      EEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE....EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                B3  2 fkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliy..rkksgr..yvltkGWkeFvkangLkegDfvvFkldgrse 89
                      +k+lt  dv+ +  lv+p + ++e+   +    + +++++  ++ + + ++l+   r+++ r  ++ ++GW +Fv+ +gLk gD ++F+ + ++ 
  Pd.00g209620.m01  8 EKELTETDVGHK--LVVPVRWLDEMppfE---GGCREVQFGVLDDKGFHFQLCCsiRNGGYRkpVLQAEGWLRFVNYKGLKIGDKIIFRPQVDHF 97
                      577878888865..9**********6542...5566788888888888888866554444345566669*******************9654444 PP

                      E CS
                B3 90 f 90
                      +
  Pd.00g209620.m01 98 R 98
                      4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
MEGAHELEKE LTETDVGHKL VVPVRWLDEM PPFEGGCREV QFGVLDDKGF HFQLCCSIRN  60
GGYRKPVLQA EGWLRFVNYK GLKIGDKIIF RPQVDHFRES IFQVRAQRQN IHGYWVDI