PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g212000.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 243aa    MW: 27265.3 Da    PI: 10.2808
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g212000.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B340.35.6e-1315911191
                      HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefe 91
                      + ++rl+lp  f+++ ++kk  + + +   +   sW v+l   ++ ++   +++GW+ Fv+ +gL+ g++vvF+++g++ f+
  Pd.00g212000.m01 15 GFNKRLSLPVAFCSSLSEKK-LD-KAV-IKSCLGSWCVRL--GRSVDGvLSFEEGWEVFVNHHGLNIGEMVVFEHKGKMVFN 91
                      45678********9997664.33.344.455668******..7777776999**********************98877774 PP
2B354.42.3e-171462201385
                       TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTE....EEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgr....yvltkGWkeFvkangLkegDfvvFkld 85 
                       ++ +++p +fa+++g++ ++   ++l+d+sgrsW + ++   +k+  r    +  +kGW +F +an+Lk gD+++F l+
  Pd.00g212000.m01 146 HAYMTFPAEFARSNGIVATS--RIILKDPSGRSWPLIISKweNKT--RgsyrIATRKGWYKFYEANKLKNGDVCIFNLK 220
                       46799**********99766..6***************7745444..444556667********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MARKCSVFFK FLVPGFNKRL SLPVAFCSSL SEKKLDKAVI KSCLGSWCVR LGRSVDGVLS  60
FEEGWEVFVN HHGLNIGEMV VFEHKGKMVF NVVAYESLGS EKEYELQSDK HQHDYKGKRP  120
LKGTASSSST TSFSTTMSKT HGDPLHAYMT FPAEFARSNG IVATSRIILK DPSGRSWPLI  180
ISKWENKTRG SYRIATRKGW YKFYEANKLK NGDVCIFNLK PVSSKSGSKS TRVLEVQITR  240
DGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24645.14e-21B3 family protein