PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g212310.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 198aa    MW: 21510.1 Da    PI: 9.3511
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g212310.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.74.4e-211665255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  Pd.00g212310.m01 16 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 65
                      59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MKQVGSSGSP PKPTKLYRGV RQRHWGKWVA EIRLPKNRTR LWLGTFDTAE EAALAYDKAA  60
YKLRGDFARL NFPHLRHNGS SVGGDFGEYK PLHSSVDAKL QAICEGLAET QKQGKAAGKP  120
SKRSSAARAP APPPEVKVET SSSPVMTDSD GSAGSSPLSD LTFVDNTEFL SWENASGSES  180
TAMLEKYPSE IDWASILN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.17e-72ERF family protein