PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g216060.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 184aa    MW: 20706.8 Da    PI: 10.4689
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g216060.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix699.1e-2257148187
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqlea 87 
                       +W+++e+ aLi+ +r+++ +lrrg+lk+++W+ev++++     +    ++++qC++k+e+l+kry+ +  ++k+   s+ +s++++f++++a
  Pd.00g216060.m01  57 CWSHEETIALIDSYRDKWYSLRRGNLKATHWQEVADAVahrcPAASPPKTAVQCRHKMEKLRKRYRTEISRAKSMpLSRFTSSWVHFKRMDA 148
                       8***********************************9977767777899*************************977999**********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    
MASSPPSSPQ DDSILPLQSD PPQAVPLALP APPPPQTQQT QQPNPTPPSS RRLPPPCWSH  60
EETIALIDSY RDKWYSLRRG NLKATHWQEV ADAVAHRCPA ASPPKTAVQC RHKMEKLRKR  120
YRTEISRAKS MPLSRFTSSW VHFKRMDAME KGPAAAKREN SERRMSFLFI AAKCLCILGT  180
KIDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.14e-50Trihelix family protein