PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g217330.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 463aa MW: 52519.5 Da PI: 5.8201

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g217330.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	78.7	1.3e-24	37	153	16	128
NAM 16 veyLkkkvegkkleleevikevdiykvePwdLp.k.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelv 100 ++Lk+ ++gk ++i+e+d yk+ePwdL + + + w+ Fs+ d ky + r+nr t++g+Wk tg+ +ev+s+ +++l+ Pd.00g217330.m01 37 IRFLKQLMQGKA----SIIPEIDFYKHEPWDLAgAglmfpDSPYQARTWFCFSRPDYKYVDSPRRNRLTEKGFWKITGQPREVKSRqlSKSLT 125 567777776666....57************843676663334788**********************************97777779 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 kktL+f+ gr +k++ktdWv +ey l Pd.00g217330.m01 126 CKKKTLTFHLGRPKKSSKTDWVKQEYYL 153 999*********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MVNLLWKKIN GKDYQVMPEI NYKPWDLPDN ESIPLFIRFL KQLMQGKASI IPEIDFYKHE 60 PWDLAGAGLM FPDSPYQART WFCFSRPDYK YVDSPRRNRL TEKGFWKITG QPREVKSRQL 120 SKSLTCKKKT LTFHLGRPKK SSKTDWVKQE YYLTPTDPGS NPNQMSGLVL YRVKYGSADY 180 ESDNNCVLGT GNLNDGEPGG FVSSDFDDMI QEPCDQQEHL DSPSPPEPPR PHQLPQLGNV 240 HGSTGDYIAS NSDNQAAAIH HMITDEEELL AYKELERVLL GSGNPDDGEL CTCVSSDMLR 300 ELCAQRGEDL DSPFPPPGPP ELGNAPDVYT DECSSWPTPI EDNDIFQTRI IFQPIITANQ 360 LATQPLTSRI KLKMKGFLSR RTHNLHINQY PFTSSLHTWE VLLEESECRV VSQHKVRKLQ 420 LIVLLFKPFE AGMEWAAGTT LKGSFMFLEA SPSSRKPSSP MVL

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MVNLLWKKIN GKDYQVMPEI NYKPWDLPDN ESIPLFIRFL KQLMQGKASI IPEIDFYKHE  60
PWDLAGAGLM FPDSPYQART WFCFSRPDYK YVDSPRRNRL TEKGFWKITG QPREVKSRQL  120
SKSLTCKKKT LTFHLGRPKK SSKTDWVKQE YYLTPTDPGS NPNQMSGLVL YRVKYGSADY  180
ESDNNCVLGT GNLNDGEPGG FVSSDFDDMI QEPCDQQEHL DSPSPPEPPR PHQLPQLGNV  240
HGSTGDYIAS NSDNQAAAIH HMITDEEELL AYKELERVLL GSGNPDDGEL CTCVSSDMLR  300
ELCAQRGEDL DSPFPPPGPP ELGNAPDVYT DECSSWPTPI EDNDIFQTRI IFQPIITANQ  360
LATQPLTSRI KLKMKGFLSR RTHNLHINQY PFTSSLHTWE VLLEESECRV VSQHKVRKLQ  420
LIVLLFKPFE AGMEWAAGTT LKGSFMFLEA SPSSRKPSSP MVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-20	NAC family protein