PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g217350.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 452aa MW: 50207.3 Da PI: 4.3828

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g217350.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	91.5	1.4e-28	17	146	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 +G+r+hP +ee+v + Lkk++eg++ + +i++ d yk+ePw+L + + + w+ Fs+ ++kya++ r nr t++g+Wk tgk + Pd.00g217350.m01 17 LRGLRYHPPEEEMV-NLLKKRLEGSQARH--IIPDNDFYKYEPWELAGrmlpDAPYQPRMWFSFSRPHHKYANSPRCNRLTAKGFWKITGKPR 106 68**********.99***99655..8**********84344433347789***************************** PP NAM 91 evlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 e++++ +++++ k+tL+f+ gr +k +kt Wv +ey l Pd.00g217350.m01 107 EIKARqlSESVTCKKRTLTFHLGRPSKQSKTGWVKQEYYL 146 9976666677788*********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MSGGSSTTTD AWVLDLLRGL RYHPPEEEMV NLLKKRLEGS QARHIIPDND FYKYEPWELA 60 GRMLPDAPYQ PRMWFSFSRP HHKYANSPRC NRLTAKGFWK ITGKPREIKA RQLSESVTCK 120 KRTLTFHLGR PSKQSKTGWV KQEYYLTSTV PGSNLSGLVL FRMKNKSADY ESDNKQQQDV 180 SIYDESADPA IGGDMAFNSQ DDQAAANHMI PEAEEHLLGS GNHNDGEPGG FVSSDSDIMQ 240 ELCAQLGLEP PQLGNVPGTG DYLASNSDNQ AAAIHPKITD EEELLAYKEL ERVLLGSGNP 300 DNGEPGSCVS SDMLSELCAQ LGEDLDSPFP PPGPPELGNA PDVYTDECSS WPTPIEDNDS 360 SLPNKNNIPS NYDSKPVSNT ASDFENQTKD ERIPEVYSQS EENLQSFFRS LEEEDYTLPS 420 PILYVEQGDV LHANNYIGCN ESQYAALFPH SS

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MSGGSSTTTD AWVLDLLRGL RYHPPEEEMV NLLKKRLEGS QARHIIPDND FYKYEPWELA  60
GRMLPDAPYQ PRMWFSFSRP HHKYANSPRC NRLTAKGFWK ITGKPREIKA RQLSESVTCK  120
KRTLTFHLGR PSKQSKTGWV KQEYYLTSTV PGSNLSGLVL FRMKNKSADY ESDNKQQQDV  180
SIYDESADPA IGGDMAFNSQ DDQAAANHMI PEAEEHLLGS GNHNDGEPGG FVSSDSDIMQ  240
ELCAQLGLEP PQLGNVPGTG DYLASNSDNQ AAAIHPKITD EEELLAYKEL ERVLLGSGNP  300
DNGEPGSCVS SDMLSELCAQ LGEDLDSPFP PPGPPELGNA PDVYTDECSS WPTPIEDNDS  360
SLPNKNNIPS NYDSKPVSNT ASDFENQTKD ERIPEVYSQS EENLQSFFRS LEEEDYTLPS  420
PILYVEQGDV LHANNYIGCN ESQYAALFPH SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17260.1	4e-24	NAC family protein