PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g217380.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 354aa    MW: 39407.3 Da    PI: 4.0283
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g217380.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM47.75.1e-151184273
               NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeek..ewyfFskrdkkyatgkr 73
                       pGfrF Pt+e lv +yLkkk+egk+ +++++i+e+d++k+eP d p   + ++ +  + +  ++ ++k+a+ k+
  Pd.00g217380.m01 11 LPGFRFYPTEEVLVGYYLKKKIEGKDSNFSHIIPEIDVCKHEPCDVPVlLLGSS-RldKDFVLCRLKNKSANYKK 84
                      69***************************999***************5233333.33255777777777665443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MEEGDSVPVV LPGFRFYPTE EVLVGYYLKK KIEGKDSNFS HIIPEIDVCK HEPCDVPVLL  60
LGSSRLDKDF VLCRLKNKSA NYKKVKADSG GCIASNSEDD QAAATDMISE PLEHLASQEV  120
GDVLNGNGDH DECTESPNGT GLIDNNDISS CDDDEIDTWI FYDFDNQAAC NLFQEQYCAE  180
PGENMDSLLP PPQPPLPPLP QDYCSSTQQS PLYTNQGNVP YVYDGDCNRQ QSPIGDRNSY  240
LTHKNNMSMN NQIEPVSNIT YGVQNRATGE SNSEVYNNST NDFKEPVSNI TCNFNNGAPN  300
ERISMACSQP KENLGSCFDP FQLQDFTLLS PMNLELGDFE HDNKLYWHAM SCNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.16e-13NAC family protein