PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g217390.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 322aa    MW: 35644.9 Da    PI: 5.896
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g217390.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM93.82.8e-29181371128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       l pG++F+Ptd+elv++yLkk+++g++ e++++i+++++ ++eP+dLp          +fFs+ d  +++g+   r+t++g+ k+tgk +e+ 
  Pd.00g217390.m01  18 LLPGIKFSPTDKELVSFYLKKRIAGEDSEFSNFIPDINLREHEPRDLP---------EFFFSEPDYMSPNGDSCYRTTNKGFYKSTGKPREIE 101
                       579***************************999**************9.........49********************************** PP

               NAM  94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++ +++++g k+ + fy+grap+ + t+ v+h+++l
  Pd.00g217390.m01 102 DElSKAVIGEKRYMPFYEGRAPEHKLTKYVLHQFSL 137
                       9988899***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MGSGGGTTDE RVSVPMGLLP GIKFSPTDKE LVSFYLKKRI AGEDSEFSNF IPDINLREHE  60
PRDLPEFFFS EPDYMSPNGD SCYRTTNKGF YKSTGKPREI EDELSKAVIG EKRYMPFYEG  120
RAPEHKLTKY VLHQFSLTKT ELAKLAPNRE FVLNHLTIKK GSTKARNPKP NYKKRKYDSN  180
CDKLAEHGIP GYIASNYKDD QAAAAANMIP EPEEHLADED VLLGSENRNE CVESESANGS  240
RLINNNDSST LAVGSPGGCF PSGYGNVAAY DPFREVSFQP EGNPISPFHP SSLRDIPLRS  300
PVHTGLLGDV VCANNSILIG MQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1168176PKPNYKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10490.12e-26NAC family protein