PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g217430.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 144aa    MW: 16381.2 Da    PI: 6.5174
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g217430.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B397.96.4e-3131119185
                       EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                       f+kv tpsdv+k++rlv+pk++ae++         + ++  l ++d++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++ 
  Pd.00g217430.m01  31 FDKVVTPSDVGKLNRLVIPKQHAERYfpldstA--NDKGLLLNFQDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFERG 119
                       89*************************999643..346779************************************************43 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MDLSLNHEQA AADGANNNNN WPPNSEREHM FDKVVTPSDV GKLNRLVIPK QHAERYFPLD  60
STANDKGLLL NFQDRTGKPW RFRYSYWNSS QSYVMTKGWS RFVKEKKLDA GDIVSFERGV  120
GDSDVDVVEA EAGYTPCFSG RLHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.11e-61B3 family protein