PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g217520.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 210aa    MW: 23475.7 Da    PI: 10.493
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g217520.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.82.4e-0890115127
                       TSSS-HHHHHHHHHHHHHTTTT-HHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktI 27 
                       r rWT eE+ ++++a k++G   W +I
  Pd.00g217520.m01  90 RERWTHEEHNKFLEALKLYGRA-WQRI 115
                       78******************88.9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MAGLRLRWFP QPNSMPLYTL SVEFVRLPSI FEPFPSTNEN YAFSGECPAS YWSLSHNPSS  60
SRKLSIRHGF LRREDLAIKA RKPYTITKQR ERWTHEEHNK FLEALKLYGR AWQRIEGNQN  120
LKKIDAKMIV GDNGTSGAPK SGNINNAFHK ELVQGEKFSS LIVSSLLQNP AAHAVASSTA  180
AFWPYTNAKN RKDPPNMAAI AAATVTAATA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46830.17e-21MYB_related family protein