PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g218150.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HD-ZIP

Protein Properties

Length: 241aa MW: 27746.6 Da PI: 4.6456

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g218150.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.5	6.3e-20	38	92	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++ +f++eq++ Le+lFe+++ + +++ +LAk+lgL+ rqV +WFqN+Ra++k Pd.00g218150.m01 38 KNKKRFSDEQIRSLESLFESESRLEPRKKMQLAKELGLQPRQVAIWFQNKRARWK 92 67789*************************************************9 PP
2	HD-ZIP_I/II	120.5	8.9e-39	39	129	2	92
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +k+r+s+eq+++LE+ Fe+e++Lep++K++la+eLglqprqva+WFqn+RAR+k+kqlE+dy+ L+++y++l+++ e+L+ke+++L + + Pd.00g218150.m01 39 NKKRFSDEQIRSLESLFESESRLEPRKKMQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYSILRANYNNLASKFEALKKEKQALVIQFQ 129 79************************************************************************************87766 PP

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence
MMLDQIEYSS PTAEDDHEGF SCMSSLEAAG SVKRKSSKNK KRFSDEQIRS LESLFESESR 60 LEPRKKMQLA KELGLQPRQV AIWFQNKRAR WKSKQLERDY SILRANYNNL ASKFEALKKE 120 KQALVIQFQK LNDLMRERPE EERQSCGESD NGDAARSESD QVKLNHLSLE KSEQGGRGVL 180 SDDDSSIKAE YFGLEDEPNL VSLVESADGS LTSTEDWGRL NSEGFFDESI SSDYQWWDFW 240 S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46680.1	3e-53	HD-ZIP family protein