PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g221810.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 326aa    MW: 35523.5 Da    PI: 6.6408
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g221810.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.70.0017108130123
                       EEETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                       ++C+ C+k+F+++  L  H  +H
  Pd.00g221810.m01 108 FECKACKKVFNSHQALGGHRASH 130
                       89**************9999888 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MSSPGSDGEE GASGRRGCGW SKRKRSMRAK VGNFNSHCPS NEEEDLANCL MMLSNATVDP  60
MEAEPEESCA SASKEEERRD PMNIMAPMSR GVAIDNNKAK GVANKGLFEC KACKKVFNSH  120
QALGGHRASH KKVKGCFAAR LDHLEDSMAD DDVITHEEFF PNKPNSTLQF DHGSNTPSAY  180
TSKRKAKVHE CSICHRVFSS GQALGGHKRC HWITSNATTD TSTLAKFHEF QESLEQQMMN  240
QRPKFDASSD PLDLKLDLNL PAPADENGGG RRERPNQSSL ENVVDEADSK VKLAKLSELK  300
DINTSGGSSP WLQVGLGSTT DVGAEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17180.16e-25C2H2 family protein